Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Gm14928-201ENSMUST00000120198 477 ntBASIC11.9□□□□□ -0.5
Hoxc5P32043 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.9□□□□□ -0.5
Hoxc5P32043 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Hoxc5P32043 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxc5P32043 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.9□□□□□ -0.5
Hoxc5P32043 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxc5P32043 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.89□□□□□ -0.51
Hoxc5P32043 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.89□□□□□ -0.51
Hoxc5P32043 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.89□□□□□ -0.51
Hoxc5P32043 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.89□□□□□ -0.51
Hoxc5P32043 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.89□□□□□ -0.51
Hoxc5P32043 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxc5P32043 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxc5P32043 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hoxc5P32043 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxc5P32043 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.88□□□□□ -0.51
Hoxc5P32043 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxc5P32043 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Hoxc5P32043 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm28911-201ENSMUST00000188837 117 ntBASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm18018-201ENSMUST00000198273 408 ntBASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm8463-201ENSMUST00000208573 613 ntBASIC11.88□□□□□ -0.51
Hoxc5P32043 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc5P32043 Gm18473-201ENSMUST00000220543 868 ntBASIC11.88□□□□□ -0.51
Hoxc5P32043 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms