Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Col8a2P25318 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Daam2-202ENSMUST00000224595 1926 ntBASIC10.7□□□□□ -0.7
Col8a2P25318 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Col8a2P25318 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.69□□□□□ -0.7
Col8a2P25318 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm38241-201ENSMUST00000192641 898 ntBASIC10.69□□□□□ -0.7
Col8a2P25318 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.69□□□□□ -0.7
Col8a2P25318 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.69□□□□□ -0.7
Col8a2P25318 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm9368-201ENSMUST00000219348 831 ntBASIC10.69□□□□□ -0.7
Col8a2P25318 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm22058-201ENSMUST00000083393 310 ntBASIC10.69□□□□□ -0.7
Col8a2P25318 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.69□□□□□ -0.7
Col8a2P25318 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Col8a2P25318 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.68□□□□□ -0.7
Col8a2P25318 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Col8a2P25318 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.68□□□□□ -0.7
Col8a2P25318 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.68□□□□□ -0.7
Col8a2P25318 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.68□□□□□ -0.7
Col8a2P25318 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Col8a2P25318 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm13297-201ENSMUST00000120205 934 ntBASIC10.68□□□□□ -0.7
Col8a2P25318 Gm13342-201ENSMUST00000121055 207 ntBASIC10.68□□□□□ -0.7
Col8a2P25318 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.68□□□□□ -0.7
Col8a2P25318 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.68□□□□□ -0.7
Col8a2P25318 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm42627-201ENSMUST00000197347 224 ntBASIC10.68□□□□□ -0.7
Col8a2P25318 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.68□□□□□ -0.7
Col8a2P25318 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.68□□□□□ -0.7
Col8a2P25318 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Col8a2P25318 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Col8a2P25318 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Col8a2P25318 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.68□□□□□ -0.7
Col8a2P25318 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms