Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Msx1P13297 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.3□□□□□ -0.44
Msx1P13297 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Msx1P13297 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.3□□□□□ -0.44
Msx1P13297 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.3□□□□□ -0.44
Msx1P13297 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Gm44286-201ENSMUST00000204098 1487 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Gm14301-201ENSMUST00000120181 324 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.3□□□□□ -0.44
Msx1P13297 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.3□□□□□ -0.44
Msx1P13297 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Msx1P13297 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.3□□□□□ -0.44
Msx1P13297 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Mir7070-201ENSMUST00000183657 86 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.3□□□□□ -0.44
Msx1P13297 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Gm37497-201ENSMUST00000195830 798 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.3□□□□□ -0.44
Msx1P13297 Gm14005-208ENSMUST00000223654 681 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Msx1P13297 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Gm26315-201ENSMUST00000083890 321 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.3□□□□□ -0.44
Msx1P13297 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Msx1P13297 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.3□□□□□ -0.44
Msx1P13297 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Msx1P13297 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Msx1P13297 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx1P13297 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Msx1P13297 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Msx1P13297 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.29□□□□□ -0.44
Msx1P13297 Gm24541-201ENSMUST00000103871 96 ntBASIC12.29□□□□□ -0.44
Msx1P13297 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Msx1P13297 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Gm9440-201ENSMUST00000119667 539 ntBASIC12.29□□□□□ -0.44
Msx1P13297 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.29□□□□□ -0.44
Msx1P13297 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC12.29□□□□□ -0.44
Msx1P13297 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Gm38247-201ENSMUST00000194675 433 ntBASIC12.29□□□□□ -0.44
Msx1P13297 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.29□□□□□ -0.44
Msx1P13297 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Msx1P13297 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.29□□□□□ -0.44
Msx1P13297 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC12.29□□□□□ -0.44
Msx1P13297 CT009711.2-202ENSMUST00000224538 973 ntBASIC12.29□□□□□ -0.44
Msx1P13297 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Msx1P13297 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.29□□□□□ -0.44
Msx1P13297 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms