Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.6□□□□□ -0.23
TnfP06804 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TnfP06804 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TnfP06804 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.59□□□□□ -0.23
TnfP06804 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TnfP06804 Mir877-201ENSMUST00000104738 85 ntBASIC13.59□□□□□ -0.23
TnfP06804 Gm12058-201ENSMUST00000118614 437 ntBASIC13.59□□□□□ -0.23
TnfP06804 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.59□□□□□ -0.23
TnfP06804 Gm25668-201ENSMUST00000157700 129 ntBASIC13.59□□□□□ -0.23
TnfP06804 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.59□□□□□ -0.23
TnfP06804 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.59□□□□□ -0.23
TnfP06804 Gm31256-201ENSMUST00000194705 506 ntBASIC13.59□□□□□ -0.23
TnfP06804 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.59□□□□□ -0.23
TnfP06804 Gm6082-201ENSMUST00000215204 454 ntBASIC13.59□□□□□ -0.23
TnfP06804 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.59□□□□□ -0.23
TnfP06804 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TnfP06804 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TnfP06804 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TnfP06804 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TnfP06804 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TnfP06804 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TnfP06804 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TnfP06804 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TnfP06804 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.58□□□□□ -0.24
TnfP06804 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.58□□□□□ -0.24
TnfP06804 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.58□□□□□ -0.24
TnfP06804 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TnfP06804 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.58□□□□□ -0.24
TnfP06804 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.58□□□□□ -0.24
TnfP06804 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TnfP06804 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TnfP06804 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.57□□□□□ -0.24
TnfP06804 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.57□□□□□ -0.24
TnfP06804 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TnfP06804 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Gm13736-201ENSMUST00000119272 253 ntBASIC13.57□□□□□ -0.24
TnfP06804 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.57□□□□□ -0.24
TnfP06804 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.57□□□□□ -0.24
TnfP06804 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
TnfP06804 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms