Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.07□□□□□ -0.64
Igh-VJ558P01758 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igh-VJ558P01758 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm16177-201ENSMUST00000120728 718 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm14760-201ENSMUST00000121831 999 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm38092-201ENSMUST00000195600 653 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm44124-201ENSMUST00000204159 472 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms