Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.86□□□□□ -0.19
Vti1aO89116 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.86□□□□□ -0.19
Vti1aO89116 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vti1aO89116 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vti1aO89116 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Vti1aO89116 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Vti1aO89116 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.85□□□□□ -0.19
Vti1aO89116 Gm12363-201ENSMUST00000122250 668 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.85□□□□□ -0.19
Vti1aO89116 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Gm17376-201ENSMUST00000166016 84 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Gm17208-201ENSMUST00000168388 535 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Gm20482-202ENSMUST00000174729 825 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Gm3890-201ENSMUST00000182416 207 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vti1aO89116 Gm7046-201ENSMUST00000221351 977 ntBASIC13.85□□□□□ -0.19
Vti1aO89116 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vti1aO89116 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vti1aO89116 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1aO89116 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Vti1aO89116 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.84□□□□□ -0.19
Vti1aO89116 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.84□□□□□ -0.19
Vti1aO89116 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vti1aO89116 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vti1aO89116 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vti1aO89116 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.84□□□□□ -0.19
Vti1aO89116 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vti1aO89116 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Gm25668-201ENSMUST00000157700 129 ntBASIC13.84□□□□□ -0.19
Vti1aO89116 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vti1aO89116 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.84□□□□□ -0.19
Vti1aO89116 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.84□□□□□ -0.19
Vti1aO89116 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1aO89116 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1aO89116 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1aO89116 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1aO89116 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms