Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.3■□□□□ 0.2
ScaperF8VQ70 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.3■□□□□ 0.2
ScaperF8VQ70 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.3■□□□□ 0.2
ScaperF8VQ70 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Gm32025-201ENSMUST00000217960 307 ntBASIC16.3■□□□□ 0.2
ScaperF8VQ70 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.3■□□□□ 0.2
ScaperF8VQ70 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ScaperF8VQ70 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.3■□□□□ 0.2
ScaperF8VQ70 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.29■□□□□ 0.2
ScaperF8VQ70 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.29■□□□□ 0.2
ScaperF8VQ70 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.29■□□□□ 0.2
ScaperF8VQ70 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.29■□□□□ 0.2
ScaperF8VQ70 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ScaperF8VQ70 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ScaperF8VQ70 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.29■□□□□ 0.2
ScaperF8VQ70 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12616-201ENSMUST00000118594 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12624-201ENSMUST00000177615 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12621-201ENSMUST00000177760 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12615-201ENSMUST00000177970 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12622-201ENSMUST00000177975 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12627-201ENSMUST00000178412 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12625-201ENSMUST00000179122 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12614-201ENSMUST00000179586 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm12613-201ENSMUST00000180323 382 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms