Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gm25604-201ENSMUST00000158359 133 ntBASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gm9132-201ENSMUST00000210182 832 ntBASIC11.06□□□□□ -0.64
Dchs1E9PVD3 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Dchs1E9PVD3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Gm15573-201ENSMUST00000119487 540 ntBASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Gm15881-201ENSMUST00000148792 942 ntBASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.05□□□□□ -0.64
Dchs1E9PVD3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms