Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Gm13996-201ENSMUST00000118456 430 ntBASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Gm28450-201ENSMUST00000187349 638 ntBASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.17□□□□□ -0.14
Scn3aA2ASI5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3aA2ASI5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 B9d1os-201ENSMUST00000137010 674 ntBASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm37666-201ENSMUST00000194110 866 ntBASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm19208-201ENSMUST00000213861 912 ntBASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms