Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm26046-201ENSMUST00000157312 166 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm6612-201ENSMUST00000170777 395 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm43106-201ENSMUST00000199485 637 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm2448-201ENSMUST00000207080 559 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 CT009489.1-201ENSMUST00000227740 1893 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm11989-201ENSMUST00000117240 672 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm11362-201ENSMUST00000118838 850 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm15004-201ENSMUST00000119192 630 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm8152-201ENSMUST00000120842 637 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Mir7058-201ENSMUST00000184637 75 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm9884-201ENSMUST00000194343 1222 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Elobl-202ENSMUST00000082339 300 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm45244-201ENSMUST00000211328 2200 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm14807-201ENSMUST00000116640 983 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm38297-201ENSMUST00000195122 1057 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 AC152169.1-201ENSMUST00000223901 701 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 AC107711.4-201ENSMUST00000228948 440 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm27528-202ENSMUST00000222916 2012 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 AC174797.1-201ENSMUST00000224339 1649 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm12397-201ENSMUST00000117674 615 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Mir3100-201ENSMUST00000174918 65 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms