Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Rprl2-201ENSMUST00000157150 290 ntBASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Gm17271-201ENSMUST00000165535 355 ntBASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Gm35960-201ENSMUST00000202712 767 ntBASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav7n-4A0A075B620 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms