Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12795-201ENSMUST00000117594 539 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm5616-201ENSMUST00000165252 384 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm8741-201ENSMUST00000174736 384 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm38210-201ENSMUST00000191944 809 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-4Q9EQM3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm11340-201ENSMUST00000119226 412 ntBASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Mir6546-201ENSMUST00000184460 62 ntBASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-4Q9EQM3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms