Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Mir6546-201ENSMUST00000184460 62 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Gm9463-201ENSMUST00000206707 601 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Gm5369-201ENSMUST00000217499 588 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Mir671-201ENSMUST00000102432 98 ntBASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Gm15036-201ENSMUST00000118880 400 ntBASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col25a1Q99MQ5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Gm45527-201ENSMUST00000211052 774 ntBASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col25a1Q99MQ5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms