Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm29741-201ENSMUST00000192667 421 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Gm44855-201ENSMUST00000205725 362 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb3Q91XZ7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gm4875-201ENSMUST00000118257 786 ntBASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gm15393-201ENSMUST00000120499 219 ntBASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gm29667-201ENSMUST00000190817 490 ntBASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms