Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Gm29127-201ENSMUST00000188304 517 ntBASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Gm32025-201ENSMUST00000217960 307 ntBASIC15.15■□□□□ 0.02
Atf7Q8R0S1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.15■□□□□ 0.02
Atf7Q8R0S1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Gm16177-201ENSMUST00000120728 718 ntBASIC15.14■□□□□ 0.01
Atf7Q8R0S1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Gm26927-201ENSMUST00000182385 965 ntBASIC15.14■□□□□ 0.01
Atf7Q8R0S1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf7Q8R0S1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.13■□□□□ 0.01
Atf7Q8R0S1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf7Q8R0S1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 297.8 ms