Protein–RNA interactions for Protein: Q8CE96

Trmt6, tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt6Q8CE96 Gm27772-201ENSMUST00000184900 187 ntBASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trmt6Q8CE96 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trmt6Q8CE96 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trmt6Q8CE96 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.65□□□□□ -0.55
Trmt6Q8CE96 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trmt6Q8CE96 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.65□□□□□ -0.55
Trmt6Q8CE96 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Gm13223-201ENSMUST00000118609 747 ntBASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Gm14057-201ENSMUST00000120631 482 ntBASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trmt6Q8CE96 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Mir8102-201ENSMUST00000184148 139 ntBASIC11.63□□□□□ -0.55
Trmt6Q8CE96 Gm27321-201ENSMUST00000185021 205 ntBASIC11.63□□□□□ -0.55
Trmt6Q8CE96 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trmt6Q8CE96 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms