Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Gm45384-201ENSMUST00000210451 277 ntBASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Gm11478-201ENSMUST00000117851 599 ntBASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc87Q8CDL9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms