Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Gm8227-201ENSMUST00000223306 571 ntBASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim47Q8C0E3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm15370-201ENSMUST00000117158 253 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm29396-201ENSMUST00000185659 716 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm43179-201ENSMUST00000198797 275 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim47Q8C0E3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gm13813-201ENSMUST00000120998 787 ntBASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim47Q8C0E3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Daam2-202ENSMUST00000224595 1926 ntBASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Gm13297-201ENSMUST00000120205 934 ntBASIC14.23□□□□□ -0.13
Trim47Q8C0E3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms