Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm14921-201ENSMUST00000118643 908 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm6334-201ENSMUST00000207083 228 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm5904-201ENSMUST00000210286 865 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm13350-201ENSMUST00000120519 479 ntBASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm2991-201ENSMUST00000173338 480 ntBASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm38341-201ENSMUST00000195357 515 ntBASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm43758-201ENSMUST00000199500 367 ntBASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap1Q8BTW8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap1Q8BTW8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap1Q8BTW8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap1Q8BTW8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms