Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp54Q8BL06 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gm5847-201ENSMUST00000178959 1595 ntBASIC17.92■□□□□ 0.46
Usp54Q8BL06 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gm15573-201ENSMUST00000119487 540 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm8194-201ENSMUST00000159783 859 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm26035-201ENSMUST00000083065 308 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm6397-201ENSMUST00000161973 1069 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm4607-201ENSMUST00000206649 577 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm9463-201ENSMUST00000206707 601 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm26448-201ENSMUST00000082446 203 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Gm7551-201ENSMUST00000089593 1074 ntBASIC17.91■□□□□ 0.46
Usp54Q8BL06 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp54Q8BL06 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gm9387-201ENSMUST00000098624 1320 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gm26286-201ENSMUST00000104166 134 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gm13809-201ENSMUST00000117921 597 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gm13888-201ENSMUST00000119148 422 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Mir6958-201ENSMUST00000184207 73 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 AC153505.1-201ENSMUST00000218819 1071 ntBASIC17.9■□□□□ 0.46
Usp54Q8BL06 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Usp54Q8BL06 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Gm14724-201ENSMUST00000118400 537 ntBASIC17.89■□□□□ 0.45
Usp54Q8BL06 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.89■□□□□ 0.45
Usp54Q8BL06 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Gm4157-201ENSMUST00000211647 679 ntBASIC17.89■□□□□ 0.45
Usp54Q8BL06 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.89■□□□□ 0.45
Usp54Q8BL06 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Usp54Q8BL06 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms