Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Exosc3Q7TQK4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Exosc3Q7TQK4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Gm25927-201ENSMUST00000175058 117 ntBASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Exosc3Q7TQK4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Exosc3Q7TQK4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms