Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm24245-201ENSMUST00000157318 57 ntBASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm6736-201ENSMUST00000166583 948 ntBASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm13689-201ENSMUST00000119360 685 ntBASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm13616-201ENSMUST00000120600 222 ntBASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Scaf4Q6PFF0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Gm15487-201ENSMUST00000122373 465 ntBASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Gm9630-201ENSMUST00000178304 885 ntBASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Gm26035-201ENSMUST00000083065 308 ntBASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms