Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 AY036118-201ENSMUST00000200021 923 ntBASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup98Q6PFD9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Gm29787-201ENSMUST00000222129 849 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nup98Q6PFD9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.87□□□□□ -0.03
Nup98Q6PFD9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Gm15515-201ENSMUST00000117827 822 ntBASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup98Q6PFD9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms