Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.66□□□□□ -0.38
VclQ64727 Gm27514-201ENSMUST00000183692 110 ntBASIC12.66□□□□□ -0.38
VclQ64727 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.66□□□□□ -0.38
VclQ64727 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.66□□□□□ -0.38
VclQ64727 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.66□□□□□ -0.38
VclQ64727 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VclQ64727 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VclQ64727 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VclQ64727 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
VclQ64727 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VclQ64727 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.65□□□□□ -0.38
VclQ64727 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VclQ64727 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.65□□□□□ -0.38
VclQ64727 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
VclQ64727 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VclQ64727 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.65□□□□□ -0.38
VclQ64727 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VclQ64727 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VclQ64727 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VclQ64727 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.65□□□□□ -0.38
VclQ64727 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.65□□□□□ -0.38
VclQ64727 Gm25927-201ENSMUST00000175058 117 ntBASIC12.65□□□□□ -0.38
VclQ64727 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.65□□□□□ -0.38
VclQ64727 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.65□□□□□ -0.38
VclQ64727 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VclQ64727 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VclQ64727 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VclQ64727 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VclQ64727 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VclQ64727 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VclQ64727 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
VclQ64727 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
VclQ64727 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
VclQ64727 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
VclQ64727 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
VclQ64727 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VclQ64727 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VclQ64727 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.64□□□□□ -0.39
VclQ64727 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.64□□□□□ -0.39
VclQ64727 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VclQ64727 Gm8099-201ENSMUST00000200510 742 ntBASIC12.64□□□□□ -0.39
VclQ64727 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.64□□□□□ -0.39
VclQ64727 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Gm9899-201ENSMUST00000065519 555 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms