Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
AtmQ62388 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.85□□□□□ -0.51
AtmQ62388 Gm27910-201ENSMUST00000185004 107 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
AtmQ62388 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.84□□□□□ -0.51
AtmQ62388 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.84□□□□□ -0.51
AtmQ62388 Gm3332-201ENSMUST00000189337 928 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.84□□□□□ -0.51
AtmQ62388 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.84□□□□□ -0.51
AtmQ62388 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
AtmQ62388 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.84□□□□□ -0.51
AtmQ62388 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Gm11989-201ENSMUST00000117240 672 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Gm11362-201ENSMUST00000118838 850 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Gm15003-201ENSMUST00000118884 446 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Gm8199-201ENSMUST00000121323 823 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.84□□□□□ -0.51
AtmQ62388 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
AtmQ62388 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.84□□□□□ -0.51
AtmQ62388 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.84□□□□□ -0.51
AtmQ62388 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
AtmQ62388 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AtmQ62388 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Gm13315-201ENSMUST00000120376 991 ntBASIC11.83□□□□□ -0.52
AtmQ62388 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.83□□□□□ -0.52
AtmQ62388 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
AtmQ62388 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
AtmQ62388 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Gm12943-201ENSMUST00000119616 210 ntBASIC11.83□□□□□ -0.52
AtmQ62388 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.83□□□□□ -0.52
AtmQ62388 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.83□□□□□ -0.52
AtmQ62388 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.83□□□□□ -0.52
AtmQ62388 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
AtmQ62388 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.83□□□□□ -0.52
AtmQ62388 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AtmQ62388 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms