Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm18304-201ENSMUST00000189162 546 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm22920-201ENSMUST00000102175 109 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.34□□□□□ -0.43
Col12a1Q60847 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Gm25063-201ENSMUST00000104666 94 ntBASIC12.34□□□□□ -0.43
Col12a1Q60847 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.34□□□□□ -0.43
Col12a1Q60847 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.34□□□□□ -0.43
Col12a1Q60847 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.34□□□□□ -0.43
Col12a1Q60847 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col12a1Q60847 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col12a1Q60847 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.34□□□□□ -0.43
Col12a1Q60847 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col12a1Q60847 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Col12a1Q60847 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.33□□□□□ -0.44
Col12a1Q60847 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm7719-201ENSMUST00000182374 975 ntBASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.33□□□□□ -0.44
Col12a1Q60847 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.33□□□□□ -0.44
Col12a1Q60847 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms