Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm12384-201ENSMUST00000119228 919 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm14660-201ENSMUST00000119809 575 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm37042-201ENSMUST00000193816 581 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm19163-201ENSMUST00000223313 780 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col10a1Q05306 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.87□□□□□ -0.51
Col10a1Q05306 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.86□□□□□ -0.51
Col10a1Q05306 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Gm14704-201ENSMUST00000120300 874 ntBASIC11.86□□□□□ -0.51
Col10a1Q05306 Gm12363-201ENSMUST00000122250 668 ntBASIC11.86□□□□□ -0.51
Col10a1Q05306 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.86□□□□□ -0.51
Col10a1Q05306 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.86□□□□□ -0.51
Col10a1Q05306 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.86□□□□□ -0.51
Col10a1Q05306 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Col10a1Q05306 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col10a1Q05306 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.85□□□□□ -0.51
Col10a1Q05306 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.85□□□□□ -0.51
Col10a1Q05306 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.85□□□□□ -0.51
Col10a1Q05306 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col10a1Q05306 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms