Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx2-3P97334 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.04■□□□□ 0.16
Nkx2-3P97334 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.04■□□□□ 0.16
Nkx2-3P97334 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.04■□□□□ 0.16
Nkx2-3P97334 Gm45118-201ENSMUST00000208928 825 ntBASIC16.04■□□□□ 0.16
Nkx2-3P97334 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Nkx2-3P97334 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.03■□□□□ 0.16
Nkx2-3P97334 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Gm7848-201ENSMUST00000210739 718 ntBASIC16.03■□□□□ 0.16
Nkx2-3P97334 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Nkx2-3P97334 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm15515-201ENSMUST00000117827 822 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm14263-201ENSMUST00000117955 746 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm5616-201ENSMUST00000165252 384 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm17040-202ENSMUST00000170597 889 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm8741-201ENSMUST00000174736 384 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm19187-201ENSMUST00000206781 892 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.02■□□□□ 0.16
Nkx2-3P97334 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.02■□□□□ 0.16
Nkx2-3P97334 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.02■□□□□ 0.16
Nkx2-3P97334 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.02■□□□□ 0.16
Nkx2-3P97334 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.02■□□□□ 0.16
Nkx2-3P97334 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nkx2-3P97334 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms