Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.79□□□□□ -0.36
Ldb1P70662 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ldb1P70662 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Gm27331-201ENSMUST00000183705 60 ntBASIC12.79□□□□□ -0.36
Ldb1P70662 Gm27847-201ENSMUST00000183711 107 ntBASIC12.79□□□□□ -0.36
Ldb1P70662 Gm27375-201ENSMUST00000183799 107 ntBASIC12.79□□□□□ -0.36
Ldb1P70662 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.79□□□□□ -0.36
Ldb1P70662 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.79□□□□□ -0.36
Ldb1P70662 Gm7561-201ENSMUST00000211203 886 ntBASIC12.79□□□□□ -0.36
Ldb1P70662 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.79□□□□□ -0.36
Ldb1P70662 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ldb1P70662 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ldb1P70662 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ldb1P70662 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.78□□□□□ -0.36
Ldb1P70662 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.78□□□□□ -0.36
Ldb1P70662 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.78□□□□□ -0.36
Ldb1P70662 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ldb1P70662 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.78□□□□□ -0.36
Ldb1P70662 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 Gm29705-201ENSMUST00000212598 474 ntBASIC12.78□□□□□ -0.36
Ldb1P70662 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.78□□□□□ -0.36
Ldb1P70662 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.78□□□□□ -0.36
Ldb1P70662 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb1P70662 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ldb1P70662 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ldb1P70662 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Ldb1P70662 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ldb1P70662 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ldb1P70662 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ldb1P70662 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ldb1P70662 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.77□□□□□ -0.36
Ldb1P70662 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ldb1P70662 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.77□□□□□ -0.37
Ldb1P70662 Gm14704-201ENSMUST00000120300 874 ntBASIC12.77□□□□□ -0.37
Ldb1P70662 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Gm24644-201ENSMUST00000157114 139 ntBASIC12.77□□□□□ -0.37
Ldb1P70662 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.77□□□□□ -0.37
Ldb1P70662 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.77□□□□□ -0.37
Ldb1P70662 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.77□□□□□ -0.37
Ldb1P70662 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.77□□□□□ -0.37
Ldb1P70662 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.77□□□□□ -0.37
Ldb1P70662 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ldb1P70662 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ldb1P70662 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Ldb1P70662 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ldb1P70662 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms