Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.39□□□□□ -0.75
Sssca1P56873 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.39□□□□□ -0.75
Sssca1P56873 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Sssca1P56873 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sssca1P56873 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Sssca1P56873 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.38□□□□□ -0.75
Sssca1P56873 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm23935-201ENSMUST00000102303 57 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Gm24270-201ENSMUST00000102326 57 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Gm13616-201ENSMUST00000120600 222 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm24245-201ENSMUST00000157318 57 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm21854-201ENSMUST00000179901 471 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Sssca1P56873 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.38□□□□□ -0.75
Sssca1P56873 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm9797-201ENSMUST00000052902 613 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Sssca1P56873 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sssca1P56873 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.38□□□□□ -0.75
Sssca1P56873 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sssca1P56873 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Sssca1P56873 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.37□□□□□ -0.75
Sssca1P56873 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.37□□□□□ -0.75
Sssca1P56873 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.37□□□□□ -0.75
Sssca1P56873 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.37□□□□□ -0.75
Sssca1P56873 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.37□□□□□ -0.75
Sssca1P56873 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sssca1P56873 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms