Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.69□□□□□ -0.22
NrlP54846 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.69□□□□□ -0.22
NrlP54846 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.69□□□□□ -0.22
NrlP54846 Gm45186-201ENSMUST00000206874 478 ntBASIC13.69□□□□□ -0.22
NrlP54846 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.69□□□□□ -0.22
NrlP54846 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NrlP54846 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.68□□□□□ -0.22
NrlP54846 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.68□□□□□ -0.22
NrlP54846 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.68□□□□□ -0.22
NrlP54846 Gm13097-201ENSMUST00000210722 397 ntBASIC13.68□□□□□ -0.22
NrlP54846 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.68□□□□□ -0.22
NrlP54846 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NrlP54846 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.68□□□□□ -0.22
NrlP54846 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.67□□□□□ -0.22
NrlP54846 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.67□□□□□ -0.22
NrlP54846 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.67□□□□□ -0.22
NrlP54846 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Gm24990-201ENSMUST00000157406 323 ntBASIC13.67□□□□□ -0.22
NrlP54846 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Gm43138-201ENSMUST00000199123 708 ntBASIC13.67□□□□□ -0.22
NrlP54846 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.67□□□□□ -0.22
NrlP54846 Gm5904-201ENSMUST00000210286 865 ntBASIC13.67□□□□□ -0.22
NrlP54846 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NrlP54846 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.67□□□□□ -0.22
NrlP54846 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NrlP54846 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.67□□□□□ -0.22
NrlP54846 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NrlP54846 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NrlP54846 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NrlP54846 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NrlP54846 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NrlP54846 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NrlP54846 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NrlP54846 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms