Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdh4P39038 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh4P39038 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh4P39038 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh4P39038 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh4P39038 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.32□□□□□ -0.44
Cdh4P39038 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdh4P39038 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdh4P39038 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh4P39038 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdh4P39038 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdh4P39038 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdh4P39038 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.31□□□□□ -0.44
Cdh4P39038 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.31□□□□□ -0.44
Cdh4P39038 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.31□□□□□ -0.44
Cdh4P39038 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdh4P39038 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdh4P39038 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh4P39038 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh4P39038 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh4P39038 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh4P39038 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms