Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Gm12403-201ENSMUST00000121384 959 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Mir1897-201ENSMUST00000122581 272 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tpm3P21107 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.38□□□□□ -0.11
Tpm3P21107 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tpm3P21107 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tpm3P21107 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm3P21107 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.37□□□□□ -0.11
Tpm3P21107 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.37□□□□□ -0.11
Tpm3P21107 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.37□□□□□ -0.11
Tpm3P21107 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 Gm5264-201ENSMUST00000190584 848 ntBASIC14.37□□□□□ -0.11
Tpm3P21107 Gm10253-201ENSMUST00000194270 940 ntBASIC14.37□□□□□ -0.11
Tpm3P21107 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.37□□□□□ -0.11
Tpm3P21107 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Tpm3P21107 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tpm3P21107 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.37□□□□□ -0.11
Tpm3P21107 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Tpm3P21107 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.37□□□□□ -0.11
Tpm3P21107 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.37□□□□□ -0.11
Tpm3P21107 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm3P21107 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.36□□□□□ -0.11
Tpm3P21107 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.36□□□□□ -0.11
Tpm3P21107 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tpm3P21107 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Gm8410-201ENSMUST00000117225 605 ntBASIC14.36□□□□□ -0.11
Tpm3P21107 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.36□□□□□ -0.11
Tpm3P21107 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.36□□□□□ -0.11
Tpm3P21107 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.36□□□□□ -0.11
Tpm3P21107 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tpm3P21107 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tpm3P21107 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm3P21107 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tpm3P21107 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms