Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm8927-201ENSMUST00000181978 981 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm38002-201ENSMUST00000193255 180 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm37008-201ENSMUST00000195712 319 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 AC132881.2-201ENSMUST00000225474 709 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 CT025525.2-201ENSMUST00000227743 423 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm3222-201ENSMUST00000071282 990 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfrsf9P20334 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm15371-201ENSMUST00000117057 784 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Mir5132-201ENSMUST00000175166 71 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm29199-201ENSMUST00000187766 775 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gm19309-201ENSMUST00000218295 205 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.67□□□□□ -0.7
Tnfrsf9P20334 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms