Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.79□□□□□ -1
Smim1P0C8K7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
Smim1P0C8K7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC8.79□□□□□ -1
Smim1P0C8K7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm13385-201ENSMUST00000121089 220 ntBASIC8.79□□□□□ -1
Smim1P0C8K7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC8.79□□□□□ -1
Smim1P0C8K7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC8.79□□□□□ -1
Smim1P0C8K7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC8.79□□□□□ -1
Smim1P0C8K7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC8.79□□□□□ -1
Smim1P0C8K7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC8.79□□□□□ -1
Smim1P0C8K7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC8.79□□□□□ -1
Smim1P0C8K7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC8.79□□□□□ -1
Smim1P0C8K7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC8.79□□□□□ -1
Smim1P0C8K7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.79□□□□□ -1
Smim1P0C8K7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Smim1P0C8K7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC8.79□□□□□ -1
Smim1P0C8K7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Smim1P0C8K7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC8.78□□□□□ -1
Smim1P0C8K7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC8.78□□□□□ -1
Smim1P0C8K7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC8.78□□□□□ -1
Smim1P0C8K7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Smim1P0C8K7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC8.78□□□□□ -1
Smim1P0C8K7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC8.78□□□□□ -1
Smim1P0C8K7 Gm6973-201ENSMUST00000117080 721 ntBASIC8.78□□□□□ -1
Smim1P0C8K7 Gm13886-201ENSMUST00000117876 1183 ntBASIC8.78□□□□□ -1
Smim1P0C8K7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC8.78□□□□□ -1
Smim1P0C8K7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC8.78□□□□□ -1
Smim1P0C8K7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC8.78□□□□□ -1
Smim1P0C8K7 CT030684.1-201ENSMUST00000227292 914 ntBASIC8.78□□□□□ -1
Smim1P0C8K7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC8.78□□□□□ -1
Smim1P0C8K7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Smim1P0C8K7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Smim1P0C8K7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms