Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Polr2aP08775 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.38□□□□□ -0.11
Polr2aP08775 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Gm26286-201ENSMUST00000104166 134 ntBASIC14.38□□□□□ -0.11
Polr2aP08775 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.38□□□□□ -0.11
Polr2aP08775 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.38□□□□□ -0.11
Polr2aP08775 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Polr2aP08775 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Mir8115-201ENSMUST00000184992 119 ntBASIC14.38□□□□□ -0.11
Polr2aP08775 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Polr2aP08775 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Polr2aP08775 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Polr2aP08775 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Polr2aP08775 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Polr2aP08775 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Polr2aP08775 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Polr2aP08775 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Polr2aP08775 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Polr2aP08775 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Gm8343-201ENSMUST00000182705 994 ntBASIC14.37□□□□□ -0.11
Polr2aP08775 Gm28388-201ENSMUST00000186262 437 ntBASIC14.37□□□□□ -0.11
Polr2aP08775 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.37□□□□□ -0.11
Polr2aP08775 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.37□□□□□ -0.11
Polr2aP08775 Gm37458-201ENSMUST00000194055 410 ntBASIC14.37□□□□□ -0.11
Polr2aP08775 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Polr2aP08775 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.37□□□□□ -0.11
Polr2aP08775 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.37□□□□□ -0.11
Polr2aP08775 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.37□□□□□ -0.11
Polr2aP08775 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Polr2aP08775 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.36□□□□□ -0.11
Polr2aP08775 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Polr2aP08775 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Polr2aP08775 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Polr2aP08775 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm11451-201ENSMUST00000118946 630 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 Gm5419-201ENSMUST00000119301 527 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 Gm15744-201ENSMUST00000161734 213 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm23153-201ENSMUST00000175323 313 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.36□□□□□ -0.11
Polr2aP08775 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Polr2aP08775 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.36□□□□□ -0.11
Polr2aP08775 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.36□□□□□ -0.11
Polr2aP08775 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Polr2aP08775 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms