Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm12314-201ENSMUST00000118104 538 ntBASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm11331-201ENSMUST00000119764 288 ntBASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm11597-201ENSMUST00000121423 964 ntBASIC14.1□□□□□ -0.15
Trdmt1O55055 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm27552-201ENSMUST00000183351 62 ntBASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm27844-201ENSMUST00000183613 62 ntBASIC14.1□□□□□ -0.15
Trdmt1O55055 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.1□□□□□ -0.15
Trdmt1O55055 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.1□□□□□ -0.15
Trdmt1O55055 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.1□□□□□ -0.15
Trdmt1O55055 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdmt1O55055 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.09□□□□□ -0.15
Trdmt1O55055 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.09□□□□□ -0.15
Trdmt1O55055 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trdmt1O55055 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdmt1O55055 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.09□□□□□ -0.15
Trdmt1O55055 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trdmt1O55055 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trdmt1O55055 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trdmt1O55055 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trdmt1O55055 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trdmt1O55055 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Gm22334-201ENSMUST00000158070 133 ntBASIC14.08□□□□□ -0.16
Trdmt1O55055 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Gm37666-201ENSMUST00000194110 866 ntBASIC14.08□□□□□ -0.16
Trdmt1O55055 Gm17812-201ENSMUST00000204935 318 ntBASIC14.08□□□□□ -0.16
Trdmt1O55055 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Gm45598-202ENSMUST00000210719 986 ntBASIC14.08□□□□□ -0.16
Trdmt1O55055 Gm8959-201ENSMUST00000213150 571 ntBASIC14.08□□□□□ -0.16
Trdmt1O55055 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trdmt1O55055 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.08□□□□□ -0.16
Trdmt1O55055 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdmt1O55055 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.08□□□□□ -0.16
Trdmt1O55055 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms