Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm12151-201ENSMUST00000121374 290 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm29667-201ENSMUST00000190817 490 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm9797-201ENSMUST00000052902 613 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh1F7BJK1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Gm38223-201ENSMUST00000194484 695 ntBASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh1F7BJK1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm13813-201ENSMUST00000120998 787 ntBASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm15487-201ENSMUST00000122373 465 ntBASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms