Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf6F6VAN0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf6F6VAN0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Atf6F6VAN0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Atf6F6VAN0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
Atf6F6VAN0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf6F6VAN0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf6F6VAN0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf6F6VAN0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.21□□□□□ -0.3
Atf6F6VAN0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Gm11814-201ENSMUST00000119515 929 ntBASIC13.2□□□□□ -0.3
Atf6F6VAN0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.2□□□□□ -0.3
Atf6F6VAN0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Gm27486-201ENSMUST00000184923 80 ntBASIC13.2□□□□□ -0.3
Atf6F6VAN0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.2□□□□□ -0.3
Atf6F6VAN0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Gm10012-201ENSMUST00000078252 192 ntBASIC13.2□□□□□ -0.3
Atf6F6VAN0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf6F6VAN0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.19□□□□□ -0.3
Atf6F6VAN0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.19□□□□□ -0.3
Atf6F6VAN0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Gm5035-201ENSMUST00000215581 927 ntBASIC13.19□□□□□ -0.3
Atf6F6VAN0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.19□□□□□ -0.3
Atf6F6VAN0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf6F6VAN0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms