Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm6334-201ENSMUST00000207083 228 ntBASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb9E9Q5G2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb9E9Q5G2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb9E9Q5G2 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.08■□□□□ 0.01
Pcdhb9E9Q5G2 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.08■□□□□ 0.01
Pcdhb9E9Q5G2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb9E9Q5G2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb9E9Q5G2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm10434-201ENSMUST00000101158 471 ntBASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm12241-201ENSMUST00000118330 726 ntBASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm15703-201ENSMUST00000120250 880 ntBASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm37489-201ENSMUST00000191883 159 ntBASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb9E9Q5G2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm14723-201ENSMUST00000118686 215 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm6621-201ENSMUST00000193251 772 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm44405-201ENSMUST00000198952 126 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm45865-201ENSMUST00000211815 945 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Olfr582-201ENSMUST00000098212 960 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb9E9Q5G2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gm13736-201ENSMUST00000119272 253 ntBASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.06■□□□□ 0
Pcdhb9E9Q5G2 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms