Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col4a6B1AVK5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Gm7722-201ENSMUST00000120646 741 ntBASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Gm16397-201ENSMUST00000122201 494 ntBASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Gm2965-201ENSMUST00000198365 343 ntBASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Gm44980-201ENSMUST00000205826 314 ntBASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a6B1AVK5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm12795-201ENSMUST00000117594 539 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm8100-201ENSMUST00000182906 988 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm38210-201ENSMUST00000191944 809 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm12579-201ENSMUST00000118040 783 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Mir8115-201ENSMUST00000184992 119 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm45398-201ENSMUST00000210561 165 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gm26448-201ENSMUST00000082446 203 ntBASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a6B1AVK5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms