Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Gm24644-201ENSMUST00000157114 139 ntBASIC14.41□□□□□ -0.1
AmfrQ9R049 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.41□□□□□ -0.1
AmfrQ9R049 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.41□□□□□ -0.1
AmfrQ9R049 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.41□□□□□ -0.1
AmfrQ9R049 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.41□□□□□ -0.1
AmfrQ9R049 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AmfrQ9R049 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AmfrQ9R049 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Gm22331-201ENSMUST00000158066 136 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.4□□□□□ -0.1
AmfrQ9R049 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Gm18062-201ENSMUST00000208020 547 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Gm18055-201ENSMUST00000208254 547 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.4□□□□□ -0.1
AmfrQ9R049 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.4□□□□□ -0.1
AmfrQ9R049 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AmfrQ9R049 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms