Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.5□□□□□ -0.57
Trem1Q9JKE2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trem1Q9JKE2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem1Q9JKE2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm11543-201ENSMUST00000120758 370 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm29310-201ENSMUST00000185468 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm21825-201ENSMUST00000185728 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm29109-201ENSMUST00000185895 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm21896-201ENSMUST00000186520 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm21873-201ENSMUST00000186728 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm21794-201ENSMUST00000187056 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm21880-201ENSMUST00000187275 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm21826-201ENSMUST00000187451 696 ntBASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Trem1Q9JKE2 Gm21198-201ENSMUST00000188393 696 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms