Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.26□□□□□ -0.77
Smco4Q9JIS3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco4Q9JIS3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm19931-201ENSMUST00000198920 368 ntBASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smco4Q9JIS3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smco4Q9JIS3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms