Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssr3Q9DCF9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Gm12428-201ENSMUST00000119844 727 ntBASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Mir3113-201ENSMUST00000175478 76 ntBASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Gm27772-201ENSMUST00000184900 187 ntBASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssr3Q9DCF9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Gm24543-201ENSMUST00000103867 82 ntBASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Gm15653-201ENSMUST00000119247 907 ntBASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssr3Q9DCF9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms