Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Gm42612-201ENSMUST00000197986 623 ntBASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Gm43170-201ENSMUST00000199827 612 ntBASIC14.04□□□□□ -0.16
Ssr1Q9CY50 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Gm20949-201ENSMUST00000206478 952 ntBASIC14.04□□□□□ -0.16
Ssr1Q9CY50 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssr1Q9CY50 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Mir7221-201ENSMUST00000184009 72 ntBASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Gm6218-201ENSMUST00000219812 628 ntBASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssr1Q9CY50 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssr1Q9CY50 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssr1Q9CY50 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms