Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm13297-201ENSMUST00000120205 934 ntBASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm2991-201ENSMUST00000173338 480 ntBASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Cts7-204ENSMUST00000225321 1257 ntBASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm7Q9CQQ8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gm6334-201ENSMUST00000207083 228 ntBASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm7Q9CQQ8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gm38341-201ENSMUST00000195357 515 ntBASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gm7783-201ENSMUST00000204795 781 ntBASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gm8227-201ENSMUST00000223306 571 ntBASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm7Q9CQQ8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms