Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Gm11524-201ENSMUST00000119349 807 ntBASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Gm28760-201ENSMUST00000185995 736 ntBASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Ska1Q9CPV1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Gm19078-201ENSMUST00000206311 727 ntBASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ska1Q9CPV1 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Syt7-204ENSMUST00000223586 1344 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms