Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm14928-201ENSMUST00000120198 477 ntBASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm12091-201ENSMUST00000146791 830 ntBASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhac1Q91Y10 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Gm27701-201ENSMUST00000184498 110 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Gm42550-201ENSMUST00000201553 960 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Gm6180-201ENSMUST00000065243 498 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhac1Q91Y10 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhac1Q91Y10 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhac1Q91Y10 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhac1Q91Y10 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhac1Q91Y10 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.04□□□□□ -0.48
Pcdhac1Q91Y10 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhac1Q91Y10 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhac1Q91Y10 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms