Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhgc5Q91XW9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Gm44069-201ENSMUST00000204898 506 ntBASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhgc5Q91XW9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhgc5Q91XW9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Pcdhgc5Q91XW9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhgc5Q91XW9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Gm21769-201ENSMUST00000211922 111 ntBASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgc5Q91XW9 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhgc5Q91XW9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms